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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VPEDSVSGLSK | NR_109758.1 | Noncoding_RNA | n[145]VPEDSVSGLSK | LINC02315 | 40974366 | 41140922 | + | 0 | 0 | 0 | + | - | 4 | 37 | 4.22 | 7.37 | LUAD, UCEC, BRCA, EOGC, OV, CCRC |
VPEDSVSGLSK | NR_109758.1 | Noncoding_RNA | n[230]VPEDSVSGLSK | LINC02315 | 40974366 | 41140922 | + | 0 | 0 | 0 | + | - | 4 | 37 | 4.22 | 7.37 | LUAD, UCEC, BRCA, EOGC, OV, CCRC |
VPEIMVSK | ENST00000313683.14, NM_001103149.1, NM_018215.3, XM_011527067.2, ENST00000438932.2 | Downstream_ORF | n[145]VPEIM[147]VSK | PNMA8A | 46467221 | 46467322 | - | 2 | 0 | 1 | - | - | 0 | 33 | 3.96 | 11.26 | OSCC |
VPEPMSSSK | XR_944068.3 | Noncoding_RNA | VPEPMSSSK | LOC105370589 | 78709456 | 78709578 | - | 0 | 0 | 0 | - | - | 3 | 40 | 4.65 | 11.67 | UCEC, LUAD |
VPFISIIK | XM_017016104.2 | Upstream_ORF | VPFISIIK | RBM20 | 110762536 | 110762658 | + | 0 | 0 | 0 | - | - | 0 | 40 | 4.43 | 8.51 | HCC, BRCA, OSCC, OV, EOGC |
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