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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
PLXNA4 | XM_006716171.4 | TMLGVASHMAAAIPGASPHF | TM[147]LGVASHMAAAIPGASPHF | 20 | 29 | 7 | 132125318 | 132125407 | - | 3'UTR | - |
PLXNA4 | XM_017012779.1 | TMLGVASHMAAAIPGASPHF | TM[147]LGVASHMAAAIPGASPHF | 20 | 29 | 7 | 132125318 | 132125407 | - | 3'UTR | - |
PPP2R5C | ENST00000556068.5 | TMLQTSVGEEPPK | 13 | 32 | 14 | 101820389 | 101820487 | + | ncRNA | - | |
AEBP1 | ENST00000223357.7 | TMRTLSTFGAR | TM[147]RTLSTFGAR | 11 | 77 | 7 | 44107484 | 44108018 | + | Out-of-frame | - |
AEBP1 | NM_001129.4 | TMRTLSTFGAR | TM[147]RTLSTFGAR | 11 | 77 | 7 | 44107484 | 44108018 | + | Out-of-frame | - |
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