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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
CLIP3 | NM_015526.2 | ARTMAALGAFGTSSALPSR | ARTM[147]AALGAFGTSSALPSR | 19 | 224 | 19 | 36017389 | 36024475 | - | Out-of-frame | - |
AC005392.1 | ENST00000419624.1 | ARVGCGAEPMQR | ARVGCGAEPM[147]QR | 12 | 54 | 19 | 43153402 | 43153566 | + | ncRNA | - |
GRM3 | XM_017012073.2 | AMITLPGPCPPTSTRPKPWLR | AM[147]ITLPGPCPPTSTRPKPWLR | 21 | 95 | 7 | 86765507 | 86786441 | + | Out-of-frame | - |
Z97205.2 | ENST00000564697.1 | AMLFLPAAMAQAKELER | AMLFLPAAM[147]AQAKELER | 17 | 34 | 6 | 164084241 | 164084345 | - | ncRNA | - |
LOC101927051 | NR_109952.1 | AMRGSFFCR | AMRGSFFCR | 9 | 69 | 22 | 37642403 | 37642612 | - | ncRNA | - |
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