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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
ABCB1 | NM_001348946.1 | CTMLGSLTPDLQMMSPR | CTM[147]LGSLTPDLQMMSPR | 17 | 41 | 7 | 87566156 | 87566824 | - | Out-of-frame | - |
Z72006.1 | ENST00000648629.1 | CVPQGAWVPGICTQIAHPMEQEHFPTR | CVPQGAWVPGICTQIAHPMEQEHFPTR | 27 | 45 | 22 | 48403549 | 48403686 | + | ncRNA | - |
ATP6V0A2 | NM_012463.3 | CLKMILLSK | CLKMILLSK | 9 | 105 | 12 | 123759817 | 123760134 | + | 3'UTR | - |
ATP6V0A2 | XM_024448910.1 | CLKMILLSK | CLKMILLSK | 9 | 105 | 12 | 123759817 | 123760134 | + | 3'UTR | - |
GNA11 | ENST00000590534.1 | CLLDSPADQTR | CLLDSPADQTR | 11 | 188 | 19 | 3117805 | 3118371 | + | ncRNA | - |
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