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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
GLYATL3 | ENST00000371197.8 | IYSTGLGPGEAMNNVSGTSPTSSPASLVCVSGMRR | IYSTGLGPGEAMNNVSGTSPTSSPASLVCVSGMRR | 35 | 96 | 6 | 49526529 | 49526819 | + | Out-of-frame | - |
GLYATL3 | NM_001010904.1 | IYSTGLGPGEAMNNVSGTSPTSSPASLVCVSGMRR | IYSTGLGPGEAMNNVSGTSPTSSPASLVCVSGMRR | 35 | 96 | 6 | 49526529 | 49526819 | + | Out-of-frame | - |
LOC107986285 | XR_001741716.1 | IYYSYFPPLK | 10 | 32 | 4 | 71593626 | 71595772 | + | ncRNA | - | |
CCDC85C | ENST00000380243.8 | KAACTSQLK | KAACTSQLK | 9 | 148 | 14 | 99506306 | 99506752 | - | 3'UTR | - |
NFIC | ENST00000641145.1 | KAACVTASWKPGAR | KAACVTASWKPGAR | 14 | 85 | 19 | 3314586 | 3314843 | + | 5'UTR | - |
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