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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
PGBD3 | NM_170753.3 | LLCSNLHHQGGGK | LLCSNLHHQGGGK | 13 | 40 | 10 | 49516793 | 49516915 | - | Out-of-frame | - |
LOC105373490 | XR_923077.2 | LLDASAQR | 8 | 95 | 2 | 95639550 | 95639837 | - | ncRNA | - | |
PAX9 | ENST00000361487.6 | LLDMGGNMLGAPHCLPTTVTFR | LLDM[147]GGNMLGAPHCLPTTVTFR | 22 | 95 | 14 | 36676313 | 36676600 | + | Out-of-frame | - |
PAX9 | ENST00000402703.6 | LLDMGGNMLGAPHCLPTTVTFR | LLDM[147]GGNMLGAPHCLPTTVTFR | 22 | 95 | 14 | 36676313 | 36676600 | + | Out-of-frame | - |
PAX9 | NM_006194.3 | LLDMGGNMLGAPHCLPTTVTFR | LLDM[147]GGNMLGAPHCLPTTVTFR | 22 | 95 | 14 | 36676313 | 36676600 | + | Out-of-frame | - |
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