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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
GPC1 | XM_011510976.2 | LVAGETPHCRR | LVAGETPHCRR | 11 | 31 | 2 | 240467253 | 240467348 | + | 3'UTR | - |
GUCY2EP | NR_024042.1 | LVFLPYDMLLFSLSYCNR | LVFLPYDMLLFSLSYCNR | 18 | 932 | 11 | 76680166 | 76721789 | - | misc_RNA | - |
LOC107987053 | XR_001746634.1 | LVGMKLAWR | LVGM[147]KLAWR | 9 | 92 | 9 | 21268894 | 21336836 | + | ncRNA | - |
PKD1 | ENST00000262304.8 | LVGVVALWQPGCCLDASLALGR | LVGVVALWQPGCCLDASLALGR | 22 | 91 | 16 | 2088986 | 2089261 | - | 3'UTR | - |
PKD1 | ENST00000423118.5 | LVGVVALWQPGCCLDASLALGR | LVGVVALWQPGCCLDASLALGR | 22 | 91 | 16 | 2088986 | 2089261 | - | 3'UTR | - |
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