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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
AKAP13 | NM_006738.5 | MDSTAMGWELR | M[147]DSTAMGWELR | 11 | 42 | 15 | 85655568 | 85655696 | + | Out-of-frame | - |
AKAP13 | NM_007200.4 | MDSTAMGWELR | M[147]DSTAMGWELR | 11 | 42 | 15 | 85655568 | 85655696 | + | Out-of-frame | - |
MARC1 | XM_011509903.3 | MDSTECWNIK | MDSTECWNIK | 10 | 62 | 1 | 220790796 | 220791504 | + | 5'UTR | - |
ZKSCAN1 | XR_002956485.1 | MDYNLGASVGGISFLAEMTRR | 21 | 55 | 7 | 100030683 | 100030850 | + | misc_RNA | - | |
ZKSCAN1 | XR_927529.2 | MDYNLGASVGGISFLAEMTRR | 21 | 55 | 7 | 100030683 | 100030850 | + | misc_RNA | - |
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