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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
ZP4 | NM_021186.4 | MSLSGTPTTSCQLELK | M[147]SLSGTPTTSCQLELK | 16 | 38 | 1 | 237889867 | 237890068 | - | Out-of-frame | - |
THRA | ENST00000585047.5 | MSMNAGISGQDK | MSM[147]NAGISGQDK | 12 | 148 | 17 | 40061947 | 40077520 | + | 5'UTR | - |
TNS3 | XM_011515476.2 | MQGAGVLAEQQPPACGR | MQGAGVLAEQQPPACGR | 17 | 48 | 7 | 47424167 | 47435345 | - | Out-of-frame | - |
TNS3 | XM_011515477.2 | MQGAGVLAEQQPPACGR | MQGAGVLAEQQPPACGR | 17 | 48 | 7 | 47424167 | 47435345 | - | Out-of-frame | - |
TNS3 | XM_011515478.2 | MQGAGVLAEQQPPACGR | MQGAGVLAEQQPPACGR | 17 | 48 | 7 | 47424167 | 47435345 | - | Out-of-frame | - |
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