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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
GJA5 | XM_017001044.1 | MSSLSLCWLWLHCPSSLAWLNSTTWAGR | MSSLSLCWLWLHCPSSLAWLNSTTWAGR | 28 | 74 | 1 | 147758467 | 147758691 | - | Out-of-frame | - |
UNC5C | XM_017008789.1 | MSTFLLKCLLNMR | MSTFLLKCLLNM[147]R | 13 | 35 | 4 | 95360815 | 95360922 | - | 5'UTR | - |
LOC107984865 | XR_001752089.2 | MSTFPPTSVYSEIQTIK | 17 | 35 | 16 | 14528531 | 14528638 | - | ncRNA | - | |
LOC105374803 | XR_940242.2 | MSTLKQPSGEAHLEK | M[147]STLKQPSGEAHLEK | 15 | 32 | 2 | 73315801 | 73315899 | + | ncRNA | - |
LOC105378502 | XR_946344.1 | MSVLLPVELPGGVLSK | M[147]SVLLPVELPGGVLSK | 16 | 55 | 10 | 117455122 | 117455443 | + | ncRNA | - |
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