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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
TTC28 | XM_011530018.3 | QPCQQQELLRPPLHDP | Q[111]PCQQQELLRPPLHDP | 16 | 39 | 22 | 27998917 | 27999036 | - | Out-of-frame | - |
TTC28 | XM_017028673.2 | QPCQQQELLRPPLHDP | Q[111]PCQQQELLRPPLHDP | 16 | 39 | 22 | 27998917 | 27999036 | - | Out-of-frame | - |
LOC112267879 | XR_002959676.1 | QPFSIGASSSIPPCK | QPFSIGASSSIPPCK | 15 | 67 | 3 | 67263732 | 67263935 | - | ncRNA | - |
AC027796.3 | ENST00000572919.1 | QPGAVSQIPNECLPK | QPGAVSQIPNECLPK | 15 | 33 | 17 | 3610289 | 3610390 | - | 3'UTR | - |
SHPK | ENST00000225519.3 | QPGAVSQIPNECLPK | QPGAVSQIPNECLPK | 15 | 33 | 17 | 3610289 | 3610390 | - | 3'UTR | - |
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