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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
LOC105372314 | XR_936407.2 | VTPLAKK | 7 | 73 | 19 | 20283515 | 20283736 | + | ncRNA | - | |
TRPM4 | ENST00000599628.5 | VTPQPCSFPIPGLGDLPK | VTPQPCSFPIPGLGDLPK | 18 | 115 | 19 | 49158321 | 49158668 | + | 3'UTR | - |
PPP6R2 | ENST00000359139.7 | VTQKQAPCGRQCLMSQR | VTQKQAPCGRQCLMSQR | 17 | 72 | 22 | 50438613 | 50439766 | + | Out-of-frame | - |
PPP6R2 | ENST00000427222.2 | VTQKQAPCGRQCLMSQR | VTQKQAPCGRQCLMSQR | 17 | 72 | 22 | 50438613 | 50439766 | + | Out-of-frame | - |
PPP6R2 | NM_001242900.1 | VTQKQAPCGRQCLMSQR | VTQKQAPCGRQCLMSQR | 17 | 72 | 22 | 50438613 | 50439766 | + | Out-of-frame | - |
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