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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
GAPT | NM_152687.3 | SISMEMR | SISM[147]EMR | 7 | 92 | 5 | 58494748 | 58495026 | + | Out-of-frame | - |
LOC100128885 | NR_077227.1 | SITASSIQSSIK | 12 | 39 | 7 | 64618401 | 64618520 | + | ncRNA | - | |
LOC105373717 | XR_001739756.1 | SITLIDYMR | 9 | 40 | 2 | 160054870 | 160054992 | + | ncRNA | - | |
VANGL2 | ENST00000368061.2 | SITMTSLSTTLPSSTCPSPSWPR | SITM[147]TSLSTTLPSSTCPSPSWPR | 23 | 241 | 1 | 160419063 | 160421093 | + | Out-of-frame | - |
VANGL2 | NM_020335.2 | SITMTSLSTTLPSSTCPSPSWPR | SITM[147]TSLSTTLPSSTCPSPSWPR | 23 | 241 | 1 | 160419063 | 160421093 | + | Out-of-frame | - |
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