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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
FAM172A | XM_017009959.2 | SQLKELSHICWLGSVHLNSP | SQLKELSHICWLGSVHLNSP | 20 | 74 | 5 | 93796685 | 93796909 | - | 3'UTR | - |
FAM172A | XM_017009961.2 | SQLKELSHICWLGSVHLNSP | SQLKELSHICWLGSVHLNSP | 20 | 74 | 5 | 93796685 | 93796909 | - | 3'UTR | - |
ZNF408 | ENST00000311764.2 | SQMPPPAWC | SQM[147]PPPAWC | 9 | 169 | 11 | 46705292 | 46705801 | + | Out-of-frame | - |
ZNF408 | NM_001184751.1 | SQMPPPAWC | SQM[147]PPPAWC | 9 | 169 | 11 | 46705292 | 46705801 | + | Out-of-frame | - |
ZNF408 | NM_024741.2 | SQMPPPAWC | SQM[147]PPPAWC | 9 | 169 | 11 | 46705292 | 46705801 | + | Out-of-frame | - |
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