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Peptides from immunopeptidome samples
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Gene | Transcript | Peptide | Modified peptide | Peptide length | protein length | Chr | Start | End | Strand | type | High.efficiency.TIS.motif |
|---|---|---|---|---|---|---|---|---|---|---|---|
CTNNA1 | ENST00000522792.1 | SVGGSEGLGYTTSAMR | SVGGSEGLGYTTSAM[147]R | 16 | 66 | 5 | 138932232 | 138932432 | + | ncRNA | - |
BCAS3 | ENST00000587872.1 | SVGTQAAGLGRR | 12 | 40 | 17 | 61380204 | 61380326 | + | ncRNA | - | |
SDK1 | XM_024446683.1 | SVLSTSCLK | SVLSTSCLK | 9 | 30 | 7 | 3894076 | 3894168 | + | 5'UTR | - |
SDK1 | XM_024446684.1 | SVLSTSCLK | SVLSTSCLK | 9 | 30 | 7 | 3894076 | 3894168 | + | 5'UTR | - |
LOC105372606 | XR_936699.2 | SVLSVSVPTLR | 11 | 40 | 20 | 37343628 | 37343750 | - | ncRNA | - |
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