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Epitopes from from upstream, downstream and out-of-frame ORFs in breast and ovarian cancer
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Gene | Transcript | Peptide | Modified peptide | Peptide length | Core peptide | HLA-allele | Cancer | Chr | Start | End | NetMHCpan prediction score | Gene has predicted canoncial neoantigens | Low expression in normal tissue | Strand | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLC24A2 | XM_005251426.4 | AFAHSVHPRK | n[145]AFAHSVHPRK | 10 | AAHSVHPRK | HLA-A30:01 | OV | 9 | 19514688 | 19514858 | 0.380986 | Yes | yes | - | 3'UTR |
SLC24A2 | XM_006716750.4 | AFAHSVHPRK | n[145]AFAHSVHPRK | 10 | AAHSVHPRK | HLA-A30:01 | OV | 9 | 19514688 | 19514858 | 0.380986 | Yes | yes | - | 3'UTR |
SLC24A2 | XM_017014592.1 | AFAHSVHPRK | n[145]AFAHSVHPRK | 10 | AAHSVHPRK | HLA-A30:01 | OV | 9 | 19514688 | 19514858 | 0.380986 | Yes | yes | - | 3'UTR |
SLC24A2 | XM_017014593.1 | AFAHSVHPRK | n[145]AFAHSVHPRK | 10 | AAHSVHPRK | HLA-A30:01 | OV | 9 | 19514688 | 19514858 | 0.380986 | Yes | yes | - | 3'UTR |
ZNF776 | ENST00000317178.9 | AISSLPLGR | n[145]AISSLPLGR | 9 | AISSLPLGR | HLA-A11:01 | OV | 19 | 57755633 | 57755881 | 0.67032 | Yes | no | + | 3'UTR |
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