top of page
CircRNA
chr9|108874894|108931201|-|35|circRNA|IKBKAP|ENST00000374647.9|36,35,34,33,32,31,30,29,28,27,26,25,24,23,22,21,20,19,18,17,16,15,14,13,12,11,10,9,8,7,6,5,4,3,2
CircRNA UID
circIKBKAP(36,35,34,33,32,31,30,29,28,27,26,25,24,23,22,21,20,19,18,17,16,15,14,13,12,11,10,9,8,7,6,5,4,3,2)
Gene
IKBKAP
Open Reading Frame (ORF)
LQIVSWHLISNRRLRFLFLRLMIHQGIVVLVSWESLHHAKSEIISDPGVQGYSRSRESSVLLSPN
Peptide
SEIISDPGVQGYSR
ORF Found in Long-Read
false
Peptide Length
14
Stop Codon
TGA
Peptide Type
Alternative
Frame
2
Proteome Support
TCGA
ORF Type
Junction
Start Codon
CTG
Number of Amino Acids from 3' Exons
14
Number of Amino Acids from 5' Exons
0
Short-Read Rescue Status
NA
CircRNA Exists in PepTransDB
false
Differentially Expressed in mCRC
NA
Peptide Exists in PepTransDB
false
Ribo-Seq Peptide Support
Ribo-Seq CircRNA Support
TransCirc
NA
Neoantigen Support
false
bottom of page