top of page

CircRNA

Gene

chr18|79410402|79411501|+|1|circRNA|NFATC1|NM_172390|2

NFATC1

CircRNA UID

circNFATC1(2)

Open Reading Frame (ORF)

LAGCPLLQTRVPLQQEEVQPQRPAAALLTPPLAHAVPARLPAGQRDRRLVVGQHHPVHQLGHRGRHQRADHRQQPGPGRWRPCQVPQDHPGAAALSGAQGGARRGGPGQPPAPGRLRARRLLLFPAHQEGRLLRPVPGGAAAPLPVGEAQAPVPYVLHENTMAMHPPTSAPPCRSPRRTPPCRPRATTFRPPHRASSRRRITPRGTEQLWTVGPRATSSPPATPGLMGPLPWRVLASR

Peptide

RGGPGQPPAPGR

ORF Found in Long-Read

false

Peptide Length

12

Stop Codon

TAA

Peptide Type

Alternative

Frame

2

Proteome Support

TCGA,PDC000116

ORF Type

Junction

Start Codon

CTG

Number of Amino Acids from 3' Exons

12

Number of Amino Acids from 5' Exons

0

Short Read Rescue Status

NA

CircRNA Exists in PepTransDB

false

Differentially Expressed in mCRC

NA

Peptide Exists in PepTransDB

false

Ribo-Seq Peptide Support

Ribo-Seq CircRNA Support

riboCIRC,TransCirc

riboCIRC,TranCirc

Potential Cryptic Translation

false

bottom of page