top of page
CircRNA
chr17|18330554|18353817|-|7|circRNA|SHMT1|ENST00000352886.10|9,8,7,6,5,4,3
CircRNA UID
circSHMT1(9,8,7,6,5,4,3)
Gene
SHMT1
Open Reading Frame (ORF)
LILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGLQHH
Peptide
VLEACSIACNKNTCPGLQHH
ORF Found in Long-Read
false
Peptide Length
20
Stop Codon
TAA
Peptide Type
Junction
Frame
3
Proteome Support
PDC000116
ORF Type
Junction
Start Codon
TTG
Number of Amino Acids from 3' Exons
16
Number of Amino Acids from 5' Exons
4
Short-Read Rescue Status
NA
CircRNA Exists in PepTransDB
false
Differentially Expressed in mCRC
NA
Peptide Exists in PepTransDB
false
Ribo-Seq Peptide Support
Ribo-Seq CircRNA Support
TransCirc
TranCirc
Neoantigen Support
false
bottom of page