top of page

PepCircDB

The Maher Lab | Washington University

CircRNA

Gene

chr16|71916461|71921453|+|4|circRNA|IST1|ENST00000544564.5|5,6,7,8

IST1

CircRNA UID

circIST1(5,6,7,8)

Open Reading Frame (ORF)

MHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMRNWPRKQGRRLLTIWLLGKMNELGSVWSTLSGKTTSWRPWRSWSCTVTCCWLGLALSSL

Peptide

NYNVPYEPDSVVMR

ORF Found in Long-Read

false

Peptide Length

14

Stop Codon

TGA

Peptide Type

Junction

Frame

1

Proteome Support

PDC000116

ORF Type

Junction

Start Codon

ATG

Number of Amino Acids from 3' Exons

13

Number of Amino Acids from 5' Exons

1

Short Read Rescue Status

NA

CircRNA Exists in PepTransDB

false

Differentially Expressed in mCRC

NA

Peptide Exists in PepTransDB

false

Ribo-Seq Peptide Support

Ribo-Seq CircRNA Support

TransCirc

TranCirc

Potential Cryptic Translation

false

bottom of page