top of page
CircRNA
chr1|27841013|27843330|2|221,145|0,2172
CircRNA UID
circPPP1R8(NE,NE)
Neoantigen
LSWVTFGW
Gene
PPP1R8
Kmer Length
8
CircRNA Input Peptide
SSTQHTALSWVTFGWNLTSLSKFPSIPR
CircRNA Expression Origin
Short-read cancer tissues, Long-read cell lines
Passing Algorithms
MHCflurry,MHCnuggetsI,NetMHC,NetMHCcons,NetMHCpan,PickPocket,HLAthena
Oncogenic Driver
false
No. of Passing Algorithms
7
Best Combined HLA Alleles
HLA-B*58:01
pVACbind Best HLA Allele
HLAthena Best HLA Allele
HLA-B*58:01
HLA-B*58:01
pVACbind Median IC50 Score
HLAthena Best MSi Score
16.19
0.089700269
pVACbind Best IC50 Score
3.89
pVACbind Best IC50 Score Method
NetMHCcons
pVACbind Median Percentile
0.155
pVACbind Best Percentile
0.01
pVACbind Best Percentile Method
NetMHCcons
bottom of page