top of page
CircRNA
chr1|116401129|116401260|1|131|0
CircRNA UID
circATP1A1(1)
Neoantigen
VSWWCSGPTW
Gene
ATP1A1
Kmer Length
10
CircRNA Input Peptide
GKSWSSPATQPSSSVSWWCSGPTWSSVRPGGIR
CircRNA Expression Origin
Long-read cell lines
Passing Algorithms
MHCflurry,MHCnuggetsI,NetMHC,NetMHCcons,NetMHCpan,PickPocket,SMM,SMMPMBEC
Oncogenic Driver
true
No. of Passing Algorithms
8
Best Combined HLA Alleles
HLA-B*58:01
pVACbind Best HLA Allele
HLAthena Best HLA Allele
HLA-B*58:01
NA
pVACbind Median IC50 Score
HLAthena Best MSi Score
27.908
NA
pVACbind Best IC50 Score
5.32
pVACbind Best IC50 Score Method
NetMHCpan
pVACbind Median Percentile
0.135
pVACbind Best Percentile
0.01575
pVACbind Best Percentile Method
MHCflurry
bottom of page