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McDonnell Genome Institute

Washington University

CircRNA

Gene

chr19|11446102|11446608|1|506|0

PRKCSH

Open Reading Frame (ORF)

LQLSHRDPAGAWQKQTGGVRPQWLSVGGTMWPTCSSLQGPTLELASGPQGVGASPPSCPLLRTPGGGGRGLGAQQRVEWGQVRGNGLQRDLAPSRVLPGGKRP

Peptide

TPGGGGR

ORF Found in Short-Read

Peptide Type

ORF Type

false

Alternative

Junction

Peptide Length

Frame

Start Codon

7

1

CTG

Stop Codon

Proteome Support

Number of Exon Blocks

TGA

TCGA

2

Peptide DNA Mapping to Exon Blocks

Long-Read Software Support

5 17 0

CIRI-long

Short Read Rescue Status

Differentially Expressed in mCRC

Novel in Long-Read

NA

CircRNA Exists in PepTransDB

Peptide Exists in PepTransDB

false

false

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