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McDonnell Genome Institute
Washington University
Transcript
lnc-VPS37D-1:1
Chromosome
chr7
Gene Name
lnc-VPS37D-1
Start
73665371
CPC Label
noncoding
End
73667700
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
NLLLPSEGK
Modified Peptide
n[145]NLLLPSEGK
Peptide Length
9
ORF Length
43
Open Reading Frame (ORF)
LQGRSPRRPAKVRNLLLPSEGKTCTGSANCNRPGWESPCLGAW
Conservation Score
1
PhyloCSF Frame 1
-5.425
No. of Spectra
50
CPC Coding Probability
0.0417191
PhyloCSF Frame 2
-3.621
CNTI Index
noncoding
Max Probability
0.9981
PhyloCSF Frame 3
-4.188
CNTI Score
-0.358205188
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