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McDonnell Genome Institute
Washington University
Transcript
lnc-TRIM60-2:1
Chromosome
chr4
Gene Name
lnc-TRIM60-2
Start
165010458
CPC Label
coding
End
165011851
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
DLSVAGITGR
Modified Peptide
n[145]DLSVAGITGR
Peptide Length
10
ORF Length
65
Open Reading Frame (ORF)
LRDLSVAGITGRCKWMTSQCGPWGCVRNPCPGRESGPCQDRACAGLSSCRMVSVWPEALFLSSFR
Conservation Score
1
PhyloCSF Frame 1
-3.527
No. of Spectra
3
CPC Coding Probability
0.935425
PhyloCSF Frame 2
9.464
CNTI Index
noncoding
Max Probability
0.996
PhyloCSF Frame 3
-3.481
CNTI Score
-0.311172005
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