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McDonnell Genome Institute
Washington University
Transcript
lnc-SECTM1-1:1
Chromosome
chr17
Gene Name
lnc-SECTM1-1
Start
82353753
CPC Label
noncoding
End
82357146
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
HPPNIPGLLAFEHPR
Modified Peptide
n[145]HPPNIPGLLAFEHPR
Peptide Length
15
ORF Length
38
Open Reading Frame (ORF)
LSLHCQPFLEVWVPSGLGILKHPPNIPGLLAFEHPRGA
Conservation Score
0.022
PhyloCSF Frame 1
-5.857
No. of Spectra
14
CPC Coding Probability
0.103634
PhyloCSF Frame 2
-5.344
CNTI Index
noncoding
Max Probability
0.7548
PhyloCSF Frame 3
-4.899
CNTI Score
-0.327480169
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