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McDonnell Genome Institute
Washington University
Transcript
lnc-SCAF4-1:3
Chromosome
chr21
Gene Name
lnc-SCAF4-1
Start
31624222
CPC Label
noncoding
End
31659531
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
DGLVVSGSSDHTIR
Modified Peptide
n[145]DGLVVSGSSDHTIR
Peptide Length
14
ORF Length
71
Open Reading Frame (ORF)
LLVLSMGTSESCLQYRDGLVVSGSSDHTIRLLDIECGSCLRVLEGHEELVRCIQFDNKRMVSRAYDGKIKV
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.363716
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.9614
PhyloCSF Frame 3
0
CNTI Score
0.688823141
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