top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-SAMD11-13:3
Chromosome
chr1
Gene Name
lnc-SAMD11-13
Start
632769
CPC Label
noncoding
End
633463
Cancer
HCC
Strand
+
Peptide
IFEIGPVFTL
Modified Peptide
n[230]IFEIGPVFTL
Peptide Length
10
ORF Length
42
Open Reading Frame (ORF)
LLHDQGYTTANALKSVEQTSFMPIVLELIPLKIFEIGPVFTL
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.0464812
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9983
PhyloCSF Frame 3
0
CNTI Score
-0.341990319
bottom of page