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McDonnell Genome Institute
Washington University
Transcript
lnc-RPS20-5:1
Chromosome
chr8
Gene Name
lnc-RPS20-5
Start
56050062
CPC Label
coding
End
56051160
Cancer
BRCA-Luminal A
Strand
-
Peptide
TLTELLNQMDGFDTLHR
Modified Peptide
n[145]TLTELLNQM[147]DGFDTLHR
Peptide Length
17
ORF Length
335
Open Reading Frame (ORF)
LKALRSVGQIVGEVFKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLIYNMSHEDPENVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAIASQLDCNFLKVVSSSIVDKYIGESAHLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLTELLNQMDGFDTLHRVKMIMATNRPDTLDPALLCPGRLDRKIHIDLPNEQTRLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLE
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.5
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.809
PhyloCSF Frame 3
0
CNTI Score
0.737286223
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