top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-RLIM-5:1
Chromosome
chrX
Gene Name
lnc-RLIM-5
Start
74473016
CPC Label
noncoding
End
74473953
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
EDTEEHQLR
Modified Peptide
n[145]EDTEEHQLR
Peptide Length
9
ORF Length
106
Open Reading Frame (ORF)
LKQPENGSKWLSHFKQWGMLTDCVVMSDPNTKPSRGFGFVTYDTVGEMDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTLKKIFVGGIKEDTEEHQLRDYFE
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.488863
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.6603
PhyloCSF Frame 3
0
CNTI Score
-0.300738379
bottom of page