top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-RACGAP1-3:1
Chromosome
chr12
Gene Name
lnc-RACGAP1-3
Start
49963915
CPC Label
noncoding
End
49968333
Cancer
OSCC
Strand
-
Peptide
ALVLGSPGTLWRSWWRMWDDK
Modified Peptide
n[145]ALVLGSPGTLWRSWWRM[147]WDDK
Peptide Length
21
ORF Length
64
Open Reading Frame (ORF)
LLARAGTCSPAPPARGRALVLGSPGTLWRSWWRMWDDKEERQWARVSQGTLRRDRGGTGQTHGP
Conservation Score
1
PhyloCSF Frame 1
-2.447
No. of Spectra
3
CPC Coding Probability
0.354904
PhyloCSF Frame 2
-1.604
CNTI Index
noncoding
Max Probability
0.9332
PhyloCSF Frame 3
-2.001
CNTI Score
-0.290944888
bottom of page