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McDonnell Genome Institute
Washington University
Transcript
lnc-PMS1-2:1
Chromosome
chr2
Gene Name
lnc-PMS1-2
Start
189923184
CPC Label
coding
End
189924878
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
GISGFNSK
Modified Peptide
n[145]GISGFNSK
Peptide Length
8
ORF Length
268
Open Reading Frame (ORF)
MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFFQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSSFDLDCDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSQRGISGFNSKSGQRGSSKSGKLKGDDLQAIKRELTQIKQKVDSFLENLEKIEKEQSKQAVEMNNVKSEEEQSSSSVKKDETNVKMESEGGADDSAEEGDLLDDDDNEDGGMTSWS
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.999985
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.6583
PhyloCSF Frame 3
0
CNTI Score
0.775997348
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