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McDonnell Genome Institute
Washington University
Transcript
lnc-PMPCA-3:1
Chromosome
chr9
Gene Name
lnc-PMPCA-3
Start
136483494
CPC Label
noncoding
End
136486067
Cancer
HCC
Strand
+
Peptide
LGWEAGGQAAAAAHAPGAAGAAGR
Modified Peptide
n[230]LGWEAGGQAAAAAHAPGAAGAAGR
Peptide Length
24
ORF Length
221
Open Reading Frame (ORF)
LGWEAGGQAAAAAHAPGAAGAAGRGGPTAPARWLPGYGVAAGTERRRKLVDGCRQSLASVLGFPRRILYCPFALHRGPGREGRPGHRAEPGVRRLARGTRGLLVPKLRPAPLLRRALPGPPWPQPCCPPGEVRPTRFVPPAASPTGALGSQPWLSARRWRVGPGARAARATQRRGEAGRRSCACHGQARQHPRPPAEDRREQVGTILCALIFRRSRGRLSG
Conservation Score
0.827
PhyloCSF Frame 1
0
No. of Spectra
3
CPC Coding Probability
0.421532
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9991
PhyloCSF Frame 3
0
CNTI Score
-0.254267969
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