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McDonnell Genome Institute
Washington University
Transcript
lnc-PLGLB1-6:2
Chromosome
chr2
Gene Name
lnc-PLGLB1-6
Start
87344932
CPC Label
noncoding
End
87349523
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
RGGEADGGGEAASGGAAER
Modified Peptide
n[145]RGGEADGGGEAASGGAAER
Peptide Length
19
ORF Length
274
Open Reading Frame (ORF)
LQCPSLPPTTNRAANRKDFIHRPCGPELSQSEAVPPRSVQSRTQLRPRGATGPPARVSAEENIALPSLYLRSVCRGELSSALAMLSGSVLRRTQLRPRKGTQRWRRRGGEADGGGEAASGGAAERRIAAERRTAAARRRDGQRRRGGQRRRGGQRRRGGETDSGGEADSGGAAERRIAAERRTAAARRRGGQRRRGGQRRRGGQRRRGGETDSGGEADSGGAAERRTAAARRRDGQRRRGRQRRRGAQRRRRRGEALAPALARRGAGPGSTPQL
Conservation Score
0.577
PhyloCSF Frame 1
0
No. of Spectra
5
CPC Coding Probability
0.337242
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
1
PhyloCSF Frame 3
0
CNTI Score
0.772056545
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