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McDonnell Genome Institute
Washington University
Transcript
lnc-PLEKHA6-1:1
Chromosome
chr1
Gene Name
lnc-PLEKHA6-1
Start
204367803
CPC Label
noncoding
End
204378303
Cancer
BRCA-Basal-like
Strand
-
Peptide
WAYGVDGGGR
Modified Peptide
n[145]WAYGVDGGGR
Peptide Length
10
ORF Length
141
Open Reading Frame (ORF)
LPPGLRPARLQWGGQPHCQGPGSDAASPAGPPPPPRPLEGGSKWGFPGTKPPAQPAPGGAESERGCRDTEMADEIDWLDLPGRWAYGVDGGGRIFFINDEEKSTSWVHPGTKSPIQSGHTSCPGLPKGWEVDSTQEGAVYF
Conservation Score
1
PhyloCSF Frame 1
5.297
No. of Spectra
7
CPC Coding Probability
0.0442394
PhyloCSF Frame 2
8.639
CNTI Index
noncoding
Max Probability
0.9997
PhyloCSF Frame 3
10.514
CNTI Score
-0.282228419
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