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McDonnell Genome Institute
Washington University
Transcript
lnc-PDLIM1-1:6
Chromosome
chr10
Gene Name
lnc-PDLIM1-1
Start
95168822
CPC Label
coding
End
95231131
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
ELVGEDEK
Modified Peptide
n[145]ELVGEDEK
Peptide Length
8
ORF Length
88
Open Reading Frame (ORF)
LTMRNTWSSGRKDQPRSRDRELVGEDEKSEGLRSFQRGPVFGMAHQGFRWGRGCWKNVDITWNAHCEALWYQDRGLVERKYKAPGLLR
Conservation Score
0.229
PhyloCSF Frame 1
0
No. of Spectra
10
CPC Coding Probability
0.745222
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9974
PhyloCSF Frame 3
0
CNTI Score
-0.299213616
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