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McDonnell Genome Institute
Washington University
Transcript
lnc-PCED1B-5:17
Chromosome
chr12
Gene Name
lnc-PCED1B-5
Start
46384022
CPC Label
noncoding
End
46681583
Cancer
BRCA-Luminal B
Strand
+
Peptide
SSAPISCIFK
Modified Peptide
n[145]SSAPISCIFK
Peptide Length
10
ORF Length
97
Open Reading Frame (ORF)
LSWKIAIGSPLFRSQAFVGWATLARGTCQDLKSIETKGSCFYTLNTISKSIIAGLKSSAPISCIFKDIHTTNLGDSLVTQRKVLLPHSKGAFFQRLY
Conservation Score
0.447
PhyloCSF Frame 1
-5.503
No. of Spectra
13
CPC Coding Probability
0.152326
PhyloCSF Frame 2
-4.121
CNTI Index
noncoding
Max Probability
0.9968
PhyloCSF Frame 3
-4.642
CNTI Score
-0.327890591
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