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McDonnell Genome Institute
Washington University
Transcript
lnc-PCDH19-7:1
Chromosome
chrX
Gene Name
lnc-PCDH19-7
Start
97975877
CPC Label
noncoding
End
97978641
Cancer
BRCA-Basal-like
Strand
-
Peptide
EIGGPNSNVK
Modified Peptide
n[145]EIGGPNSNVK
Peptide Length
10
ORF Length
113
Open Reading Frame (ORF)
LVANVTNPSSLEYMEKSTLDAIYYICQEIYREQLRDKSKEIGGPNSNVKLVATKALLNYWSSPEQTLTKSLKGNLFCRLSTEQPIIKIIRYKWVHYRIWSRKCPYIISTWTHT
Conservation Score
1
PhyloCSF Frame 1
-5.432
No. of Spectra
4
CPC Coding Probability
0.173722
PhyloCSF Frame 2
-5.266
CNTI Index
noncoding
Max Probability
0.9954
PhyloCSF Frame 3
-4.955
CNTI Score
-0.348291946
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