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McDonnell Genome Institute
Washington University
Transcript
lnc-PAPPA2-1:5
Chromosome
chr1
Gene Name
lnc-PAPPA2-1
Start
176207664
CPC Label
noncoding
End
176214256
Cancer
PRAD
Strand
+
Peptide
NLLYSGTAGMSFITVSHPSHR
Modified Peptide
Peptide Length
21
ORF Length
37
Open Reading Frame (ORF)
LNQYGNSYFRNLLYSGTAGMSFITVSHPSHRRLSIYH
Conservation Score
0.239
PhyloCSF Frame 1
-5.247
No. of Spectra
2
CPC Coding Probability
0.0273529
PhyloCSF Frame 2
-4.605
CNTI Index
noncoding
Max Probability
0.8496
PhyloCSF Frame 3
-4.504
CNTI Score
-0.361895867
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