top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-ORAOV1-4:1
Chromosome
chr11
Gene Name
lnc-ORAOV1-4
Start
69345077
CPC Label
noncoding
End
69353032
Cancer
OSCC
Strand
-
Peptide
LQAVISCDFLLDPHDNPLSK
Modified Peptide
n[145]LQAVISCDFLLDPHDNPLSK
Peptide Length
20
ORF Length
54
Open Reading Frame (ORF)
LQAVISCDFLLDPHDNPLSKYCYHNLHFTEEETAAQRGYLLRRHGNYVPTKNCT
Conservation Score
0.722
PhyloCSF Frame 1
-4.153
No. of Spectra
3
CPC Coding Probability
0.00945901
PhyloCSF Frame 2
-4.135
CNTI Index
noncoding
Max Probability
0.9208
PhyloCSF Frame 3
-3.88
CNTI Score
-0.376711569
bottom of page