top of page

McDonnell Genome Institute

Washington University

Transcript

lnc-NPAP1-9:1

Chromosome

chr15

Gene Name

lnc-NPAP1-9

Start

24206783

CPC Label

noncoding

End

24225854

Cancer

OV

Strand

+

Peptide

HFTNICGGISPMTKAILRGEAK

Modified Peptide

n[145]HFTNICGGISPMTKAILRGEAK

Peptide Length

22

ORF Length

74

Open Reading Frame (ORF)

MHFTNICGGISPMTKAILRGEAKWEGVHLPPPQCIVNVRKYNLPGRIQEVTATMEKLAKVNIIQPAQSPFNHPV

Conservation Score

0.371

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.0642323

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.0593

PhyloCSF Frame 3

0

CNTI Score

-0.426712167

bottom of page