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McDonnell Genome Institute

Washington University

Transcript

lnc-NBEA-2:4

Chromosome

chr13

Gene Name

lnc-NBEA-2

Start

35858064

CPC Label

noncoding

End

35907587

Cancer

BRCA-Luminal B

Strand

+

Peptide

STREPLIFSK

Modified Peptide

n[145]STREPLIFSK

Peptide Length

10

ORF Length

61

Open Reading Frame (ORF)

MSTREPLIFSKEQDIIFNALKTNFKLKNVEGYTYTHTHTRMFYNKTIHPLQSQALIYALTK

Conservation Score

0.997

PhyloCSF Frame 1

-4.478

No. of Spectra

1

CPC Coding Probability

0.207389

PhyloCSF Frame 2 

-4.694

CNTI Index

noncoding

Max Probability

0.8556

PhyloCSF Frame 3

-5.397

CNTI Score

-0.361131911

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