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McDonnell Genome Institute
Washington University
Transcript
lnc-MUC20-67:1
Chromosome
chr3
Gene Name
lnc-MUC20-67
Start
195658061
CPC Label
coding
End
195666682
Cancer
CCRC
Strand
+
Peptide
GSDWLGDQDAIHYVTEQAPTAMVEVENYGMPFSR
Modified Peptide
n[230]GSDWLGDQDAIHYVTEQAPTAM[147]VEVENYGMPFSR
Peptide Length
34
ORF Length
189
Open Reading Frame (ORF)
LEGQALRAAFGLSEAEFDTACVTKLFPTRSHTVAAQVGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYVTEQAPTAMVEVENYGMPFSRTEDGKIYQRAFGGHSLKFGKGRQAHRCCCVADRTGHSILHTLYGRSLRYDTSCFVEYFALDLLMENGECRGVFALCIQDGSIHRIRAKNTIVATG
Conservation Score
1
PhyloCSF Frame 1
10.803
No. of Spectra
52
CPC Coding Probability
0.929604
PhyloCSF Frame 2
-4.502
CNTI Index
noncoding
Max Probability
0.9999
PhyloCSF Frame 3
12.759
CNTI Score
-0.273457626
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