top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-MTPAP-1:1
Chromosome
chr10
Gene Name
lnc-MTPAP-1
Start
30302825
CPC Label
noncoding
End
30306066
Cancer
CCRC
Strand
-
Peptide
LFDVLILIALDKDSISILMLQDK
Modified Peptide
n[230]LFDVLILIALDKDSISILM[147]LQDK
Peptide Length
23
ORF Length
55
Open Reading Frame (ORF)
LSETLIQVFKYLIKLCEKLKLFDVLILIALDKDSISILMLQDKNCVKQYLNLNVV
Conservation Score
0.94
PhyloCSF Frame 1
-4.608
No. of Spectra
1
CPC Coding Probability
0.0782431
PhyloCSF Frame 2
-6.089
CNTI Index
noncoding
Max Probability
0.1602
PhyloCSF Frame 3
-4.007
CNTI Score
-0.404130937
bottom of page