top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-LYRM4-2:1
Chromosome
chr6
Gene Name
lnc-LYRM4-2
Start
5065794
CPC Label
coding
End
5066982
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
VLNSILDFK
Modified Peptide
n[145]VLNSILDFK
Peptide Length
9
ORF Length
209
Open Reading Frame (ORF)
MWIPVAGFPPRLRLSALGGAGRFCILGSGAAMRKHLPARNRRGLSDSSPQLWPDPDFRNSPRRVLNSILDFKRYVTNRRLAETLAQIVWRKQNRPPHLLLQCSPGPGILTQALLEIGAKVVALESDKTFIPHLESLGKNLDGKLQVIHCDFFKIDPRSGGVIKPPAMASQGLFQNLGIEAVPWTAGSPLKVTRMFSSRGEKRATLETCI
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.797298
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.956
PhyloCSF Frame 3
0
CNTI Score
0.616138867
bottom of page