top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-LMX1A-8:1
Chromosome
chr1
Gene Name
lnc-LMX1A-8
Start
164559094
CPC Label
noncoding
End
164559612
Cancer
BRCA-Basal-like
Strand
-
Peptide
AGGLQCK
Modified Peptide
n[145]AGGLQCK
Peptide Length
7
ORF Length
104
Open Reading Frame (ORF)
LIGRKERKAGGLQCKLSPPTPRCPPPPLRARVISKGVGCCKSQISPSRGGRQSTGSLLLRVSANSSSPVSLLLLFSSGSGLQKHIQKNHSLRGGGGGGEEGGGG
Conservation Score
1
PhyloCSF Frame 1
2.409
No. of Spectra
11
CPC Coding Probability
0.223123
PhyloCSF Frame 2
0.377
CNTI Index
noncoding
Max Probability
0.997
PhyloCSF Frame 3
1.638
CNTI Score
-0.330386544
bottom of page