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McDonnell Genome Institute
Washington University
Transcript
lnc-KCNH3-2:1
Chromosome
chr12
Gene Name
lnc-KCNH3-2
Start
49537614
CPC Label
noncoding
End
49539008
Cancer
BRCA-Luminal B
Strand
+
Peptide
EGAPCSRPR
Modified Peptide
n[145]EGAPCSRPR
Peptide Length
9
ORF Length
124
Open Reading Frame (ORF)
LANRGREEERRWQASPGDRRSAGGQEKTAAPGPAPPRREGAPCSRPRAAPRAAPRGALQDELREARGSAFLALLVPGPARTRQLLLAETPHRSSWIHFPERQVEDEKVSRAGQLCAQNPRPICF
Conservation Score
1
PhyloCSF Frame 1
-0.991
No. of Spectra
1
CPC Coding Probability
0.013689
PhyloCSF Frame 2
3.623
CNTI Index
noncoding
Max Probability
0.1991
PhyloCSF Frame 3
-2.077
CNTI Score
-0.282550263
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