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McDonnell Genome Institute
Washington University
Transcript
lnc-KATNAL2-11:1
Chromosome
chr18
Gene Name
lnc-KATNAL2-11
Start
47630111
CPC Label
noncoding
End
47630848
Cancer
BRCA-Luminal A
Strand
+
Peptide
TSLDIEEYSNTEVQK
Modified Peptide
n[145]TSLDIEEYSNTEVQK
Peptide Length
15
ORF Length
245
Open Reading Frame (ORF)
MDGTRTSLDIEEYSNTEVQKNQVLTLEEWQDKWVNGNTAFHQEQGPQLLKKHLDTFLKGESGLRVFFPLCRKEVEMKWFADRGHSVVGVEISELGIREFFTEQNLSYSEEPITEIPGTKAFKSSSGNISSYCCSIFDLPRTNIGTFDMIWDRGALVAINPGDRKCYADIMLSLLGKKFQYLLCVFLTIQLNIQVHHFMFHMLKLKGCLVKYAIYIVLRRLMLLKNDIKIGGLTIFLKSYIYLQKS
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
3
CPC Coding Probability
0.362155
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.9837
PhyloCSF Frame 3
0
CNTI Score
0.537834262
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