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McDonnell Genome Institute

Washington University

Transcript

lnc-ITPR3-11:1

Chromosome

chr6

Gene Name

lnc-ITPR3-11

Start

33900621

CPC Label

noncoding

End

33904161

Cancer

BRCA-Luminal A

Strand

+

Peptide

QIDHEVEK

Modified Peptide

n[145]QIDHEVEK

Peptide Length

8

ORF Length

45

Open Reading Frame (ORF)

LFQGWRPARQAQHKEKGTKGFKQIDHEVEKNMICNRRASSWDEQP

Conservation Score

0.036

PhyloCSF Frame 1

-5.304

No. of Spectra

19

CPC Coding Probability

0.434016

PhyloCSF Frame 2 

-6.313

CNTI Index

noncoding

Max Probability

1

PhyloCSF Frame 3

-4.369

CNTI Score

-0.324717706

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