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McDonnell Genome Institute
Washington University
Transcript
lnc-ITGAL-2:9
Chromosome
chr16
Gene Name
lnc-ITGAL-2
Start
30535057
CPC Label
coding
End
30546994
Cancer
BRCA-Luminal A
Strand
+
Peptide
FGEGLATGSLGQR
Modified Peptide
n[145]FGEGLATGSLGQR
Peptide Length
13
ORF Length
171
Open Reading Frame (ORF)
MTFCLLQCPPLSVVPITHSLEELWEILEAPLGVWTLLGKNQGQSSQSWRSASEVHVTRPVDPLKGPWLKHCQQWGQVKEHRPAGQQEAGVGLVVGEVGAIPAAGKGSLPGVPEAWLKVLAKCGCTGDRNEVLSECQMLRPGRDCRFGEGLATGSLGQRLRDQVSVSDTKGL
Conservation Score
0.567
PhyloCSF Frame 1
-4.475
No. of Spectra
1
CPC Coding Probability
0.720683
PhyloCSF Frame 2
-2.815
CNTI Index
noncoding
Max Probability
0.1654
PhyloCSF Frame 3
-3.847
CNTI Score
-0.336278602
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